WormGUIDES Atlas integrates tools for exploratory data analyses and insight sharing. Navigation is linked between 3D and lineage tree views. In both contexts, community single cell information can be accessed with a click, creating live web queries that summarize knowledge about a cell. In many cases this information can be used to control cell color, creating customized interactive visualizations. A user's insights can be annotated directly into the embryo model with a note-taking interface that attaches each annotation to a cell or other point in space and time. These multi-dimensionally located notes can then be ordered into a (chrono)logical story sequence that explains developmental events as they unfold in the embryo. Annotations can be saved and shared with collaborators or the community.
Among neural atlases WormGUIDES is unique in containing both subcellular shape information and developmental dynamics through time. Currently, it contains the positions of all cells and dynamics of initial outgrowth events for dozens of individual neurons through the onset of embryonic movement. Acquisition of all additional neuronal outgrowths is ramping up and tools and methods are being developed to expand the atlas into the period after embryonic motion begins.